Welcome to autodmri’s documentation!

This is the documentation detailing the internal of Automated characterization of noise distributions in diffusion MRI data, which is available at https://github.com/samuelstjean/autodmri.

You can find the original paper and full details of the algorithm as presented in

St-Jean S, De Luca A, Tax CMW, Viergever MA, Leemans A.
Automated characterization of noise distributions in diffusion MRI data.
Med Image Anal. June 2020:101758. doi:10.1016/j.media.2020.101758

Which you can grab a copy from media.

There is also the previous conference manuscript which details a different set of experiments

St-Jean, Samuel, De Luca, Alberto, Viergever, Max A. and Leemans, Alexander
‘Automatic, Fast and Robust Characterization of Noise Distributions for Diffusion MRI’,
MICCAI 2018. Springer International Publishing, pp. 304–312. doi: 10.1007/978-3-030-00928-1_35.

Which is also available on the publisher website miccai or arxiv_miccai.

The datasets are also available at zenodo.

You can find below the documentation for each modules.

Indices and tables